The detailed information of tRNA gene sequence


Sequence ID>WENV170690772
Genome IDLFRM01360375
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 745
End posion on genome 831
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gccgcgcagt
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGTAGACGCGCTAGGTTCAGGGTCTAGTTGGGGTTCCCCAGTG
GAAGTTCGAGTCTTCTCTTCGGCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170690772	Leu	CAG
                   t      ACCA nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T C T T C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTGGGGTTCCCCAGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G + T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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