The detailed information of tRNA gene sequence


Sequence ID>WENV170690820
Genome IDLFRM01363845
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 426
End posion on genome 503
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctccgcacgc
tRNA gene sequence 
AGGTCTGTAGCTCGAACTGGTTAGAGCACCGCACTCCAAATGCGGGGGTTGAGGGTTCGA
ATCCTTCCAGGCCTGCCA
Downstream region at tRNA end position 
ttttgttttt
Secondary structure (Cloverleaf model)
>WENV170690820	Trp	CCA
                   c      GCCA ttttgttttt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     T - A
                     G - C          T A
                    T     C T T C C     A
    C A A G        A      | | + | |     G
  T         C T C G       G A G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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