The detailed information of tRNA gene sequence


Sequence ID>WENV170690823
Genome IDLFRM01364078
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6012
End posion on genome 6087
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
atagccatat
tRNA gene sequence 
GGAATTATAGCTCAGCTGGGAGAGCATCTGCTTGACGTGCAGAGGGTCGGGGGTTCGAGT
CCCTCTAATTCCACCA
Downstream region at tRNA end position 
ttggaaaatt
Secondary structure (Cloverleaf model)
>WENV170690823	Val	GAC
                   t      ACCA ttggaaaatt
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     T - A
                     A - T          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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