The detailed information of tRNA gene sequence


Sequence ID>WENV170690824
Genome IDLFRM01364078
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6202
End posion on genome 6286
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tacaggaaat
tRNA gene sequence 
GCCACTGTGTTGGAATTGGTAGACAAACTTGACTCAAAATCAAGCGCCGCAAGGCGTGCC
GGTTCGAGTCCGGCCAGTGGCACCA
Downstream region at tRNA end position 
agttaagtat
Secondary structure (Cloverleaf model)
>WENV170690824	Leu	CAA
                   t      ACCA agttaagtat
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     T - A
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G T T       G C C G G     C
    G         | | |                 T T
    G       A C A A
      T A G        A     CGCCGCAAGGCGT
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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