The detailed information of tRNA gene sequence


Sequence ID>WENV170690836
Genome IDLFRM01364862
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2132
End posion on genome 2207
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
caatttcagt
tRNA gene sequence 
GGTTCGATAGCTCAGTCGGTAGAGCAAAGGATTGAAAATCCTTGTGTCGACAGTTCGATT
CTGTCTCGAACCACCA
Downstream region at tRNA end position 
ttttatggat
Secondary structure (Cloverleaf model)
>WENV170690836	Phe	GAA
                   t      ACCA ttttatggat
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     G - C
                     A - T          T T
                    T     C T G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G A C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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