The detailed information of tRNA gene sequence


Sequence ID>WENV170690862
Genome IDLFRM01366625
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1894
End posion on genome 1810
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
agttttatac
tRNA gene sequence 
GGAGGGATACCCAAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGTCACTGACTTCGAT
GGTTCGAATCCATCTCCCTCCACCA
Downstream region at tRNA end position 
ataaaaaaac
Secondary structure (Cloverleaf model)
>WENV170690862	Tyr	GTA
                   c      ACCA ataaaaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T A C C     A
      T G A        A      | | | | |     G
    G       A C C C       G A T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGTCACTGACTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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