The detailed information of tRNA gene sequence


Sequence ID>WENV170690866
Genome IDLFRM01366871
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 33227
End posion on genome 33153
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tgaacaccgt
tRNA gene sequence 
GGCCCATTGGTCAAGCGGTTAAGACACCGCCCTCTCACGGCGGTAACAGGGGTTCGAGTC
CCCTATGGGTCACCA
Downstream region at tRNA end position 
aaaaagcatc
Secondary structure (Cloverleaf model)
>WENV170690866	Glu	CTC
                   t      ACCA aaaaagcatc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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