The detailed information of tRNA gene sequence


Sequence ID>WENV170690889
Genome IDLFRM01368739
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1098
End posion on genome 1184
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttaaaattat
tRNA gene sequence 
GCGAGTGTGGCGGAATAGGTAGACGCGCGGGACTTAAAATCCCGTTCCGGTTTCGGAGTG
TGAGTTCGATTCTCACCATTCGCACCA
Downstream region at tRNA end position 
tttttttaaa
Secondary structure (Cloverleaf model)
>WENV170690889	Leu	TAA
                   t      ACCA tttttttaaa
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C          T T
                    T     C A C T C     A
      T A A        G      | | | | |     G
    A       G G C G       G T G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCCGGTTTCGGAGT
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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