The detailed information of tRNA gene sequence


Sequence ID>WENV170690978
Genome IDLFRM01374146
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6703
End posion on genome 6779
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
atttttaagt
tRNA gene sequence 
GCGTCTGTAGTTCAACTGGATAGAATACTCGGTTTCGACCCGAGGGGTTGTGGGTTCGAC
TCCTACCAGGCGTACCA
Downstream region at tRNA end position 
ctttcaaatt
Secondary structure (Cloverleaf model)
>WENV170690978	Arg	TCG
                   t      ACCA ctttcaaatt
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     T - A
                     G - C          T C
                    T     C A T C C     A
      C A A        A      | | + | |     G
    T       C T T G       G T G G G     C
    G       | | | +                 T T
    G       G A A T
      A T A        A     GGGTT
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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