The detailed information of tRNA gene sequence


Sequence ID>WENV170690996
Genome IDLFRM01374722
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5939
End posion on genome 6014
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccgtcttgct
tRNA gene sequence 
GCCGCCCTAGCTCAGTCGGTAGAGCGACGCTCTCGTAAAGCGTAGGTCACGGGTTCGATT
CCCGTGGGCGGCTCCA
Downstream region at tRNA end position 
aggcctccgg
Secondary structure (Cloverleaf model)
>WENV170690996	Thr	CGT
                   t      TCCA aggcctccgg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G          T T
                    T     T G C C C     A
      T G A        A      | | | | |     G
    C       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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