The detailed information of tRNA gene sequence


Sequence ID>WENV170691012
Genome IDLFRM01375088
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1793
End posion on genome 1707
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tgcagtaccc
tRNA gene sequence 
GCCCAGGTGGTGAAATTGGTAGACACGCTAGCTTCAGGTGCTAGTGGCCTCACGGCCGTG
GAAGTTCGAGTCTTCTCCTGGGCACCA
Downstream region at tRNA end position 
acacagacaa
Secondary structure (Cloverleaf model)
>WENV170691012	Leu	CAG
                   c      ACCA acacagacaa
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T C T T C     A
      T A A        G      + | | | |     G
    T       A G T G       G G A A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGCCTCACGGCCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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