The detailed information of tRNA gene sequence


Sequence ID>WENV170691038
Genome IDLFRM01376592
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 488
End posion on genome 560
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttgaaaatag
tRNA gene sequence 
GGGGTTGTAGCTCAGCTGGGAGAGCATCAGGCTGGCAGTCTGAGGGTCAGGGGTTCGATC
CCCCTCAACTCCAttt
Downstream region at tRNA end position 
gattagtaaa
Secondary structure (Cloverleaf model)
>WENV170691038	Ala	GGC
                   g      Attt gattagtaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     T - A
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G + T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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