The detailed information of tRNA gene sequence


Sequence ID>WENV170691061
Genome IDLFRM01378126
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 87
End posion on genome 12
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cccaccacca
tRNA gene sequence 
GTCCCCATCGTCTAGTGGCCTAGGACGGCGGCCTCTCACGCCGCTAACAGGGGTTCAAAC
CCCCTTGGGGACGCCA
Downstream region at tRNA end position 
cgatttttct
Secondary structure (Cloverleaf model)
>WENV170691061	Glu	CTC
                   a      GCCA cgatttttct
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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