The detailed information of tRNA gene sequence


Sequence ID>WENV170691078
Genome IDLFRM01379294
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 27853
End posion on genome 27767
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
atctggcaga
tRNA gene sequence 
GCAGGGGTAGCCAAGCTTGGCCAACGGCGCAGGACTTAGGATCCTGTCCTTAGTGGTCCG
TGCGTTCAAATCGCACCCCCTGCACCA
Downstream region at tRNA end position 
ctgccatttc
Secondary structure (Cloverleaf model)
>WENV170691078	Leu	TAG
                   a      ACCA ctgccatttc
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C G C     A
    T C G A        A      | | | | |     A
  T         A C C G       G T G C G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCCTTAGTGGTCC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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