The detailed information of tRNA gene sequence


Sequence ID>WENV170691091
Genome IDLFRM01379698
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6958
End posion on genome 6874
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aaattcttct
tRNA gene sequence 
GGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCGAAGACTTCGGA
GGTTCGAATCCTCCCCCCTCCACCA
Downstream region at tRNA end position 
aaaaagtcac
Secondary structure (Cloverleaf model)
>WENV170691091	Tyr	GTA
                   t      ACCA aaaaagtcac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
      T G A        T      | | | | |     G
    G       G C C C       G G A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGTCGAAGACTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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