The detailed information of tRNA gene sequence


Sequence ID>WENV170691103
Genome IDLFRM01380412
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 105829
End posion on genome 105753
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccatgagt
tRNA gene sequence 
GGCCCGGTAGTTCAGACGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
ttagcctcgg
Secondary structure (Cloverleaf model)
>WENV170691103	Asp	GTC
                   t      GCCA ttagcctcgg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      A G A        A      + | | | |     G
    C       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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