The detailed information of tRNA gene sequence


Sequence ID>WENV170691137
Genome IDLFRM01381674
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5554
End posion on genome 5478
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tatttttgca
tRNA gene sequence 
GCGCCCGTAGCTCAACTGGACAGAGCAACGGACTTCTAATCCGTAGGTTGTGGGTTCGAG
TCCCGCCGGGCGCGCCA
Downstream region at tRNA end position 
gttatccaaa
Secondary structure (Cloverleaf model)
>WENV170691137	Arg	TCT
                   a      GCCA gttatccaaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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