The detailed information of tRNA gene sequence


Sequence ID>WENV170691144
Genome IDLFRM01382136
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 94
End posion on genome 170
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taggaaacat
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCAGGGGTTCGAG
CCCCCTTCGGGTCGCCA
Downstream region at tRNA end position 
aatatgccta
Secondary structure (Cloverleaf model)
>WENV170691144	Asp	GTC
                   t      GCCA aatatgccta
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T          C G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T T G       A G G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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