The detailed information of tRNA gene sequence


Sequence ID>WENV170691152
Genome IDLFRM01382374
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1324
End posion on genome 1400
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taggattctt
tRNA gene sequence 
GGACCCTTAGCTCAGTTGGTTAGAGCTACCGGCTCATAACCGGTTGGTCGTAGGTTCGAG
TCCTACAGGGTCCACCA
Downstream region at tRNA end position 
aaaatggagg
Secondary structure (Cloverleaf model)
>WENV170691152	Met	CAT
                   t      ACCA aaaatggagg
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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