The detailed information of tRNA gene sequence


Sequence ID>WENV170691201
Genome IDLFRM01384604
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5073
End posion on genome 5157
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
agtcagtcaa
tRNA gene sequence 
GCAGGGGTAGCCAAGCCTGGCCAACGGCGTAGGATTCAGGGTCCTATCCTTAGTGGTTCG
GGGGTTCAAATCCCTTCCCCTGCACtt
Downstream region at tRNA end position 
ctcttctcac
Secondary structure (Cloverleaf model)
>WENV170691201	Leu	CAG
                   a      ACtt ctcttctcac
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C C G A        A      + + | | |     A
  T         A C C G       G G G G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCCTTAGTGGTTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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