The detailed information of tRNA gene sequence


Sequence ID>WENV170691252
Genome IDLFRM01388666
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 222
End posion on genome 146
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cttcttctgc
tRNA gene sequence 
AGGCGGTTAGCTCAGTTGGTTAGAGCGCCACGTTGACATCGTGGAGGTCGTTGGTTCGAT
TCCAATACCGCCTACCA
Downstream region at tRNA end position 
aattcctgat
Secondary structure (Cloverleaf model)
>WENV170691252	Val	GAC
                   c      ACCA aattcctgat
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T T
                    T     T A A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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