The detailed information of tRNA gene sequence


Sequence ID>WENV170691268
Genome IDLFRM01388969
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 9115
End posion on genome 9028
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
taagtgtgtc
tRNA gene sequence 
GCACTCGTGGTGAAATAGGTAGACACAAGAGACTTAAAATCTCTCGGGCATTGCGCCCGT
GCCGGTTCGATTCCGGCCGAGTGCACCA
Downstream region at tRNA end position 
gagagaaaaa
Secondary structure (Cloverleaf model)
>WENV170691268	Leu	TAA
                   c      ACCA gagagaaaaa
                     G - C
                     C - G
                     A - T
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    A       A G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGGGCATTGCGCCCGT
                    A - T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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