The detailed information of tRNA gene sequence


Sequence ID>WENV170691271
Genome IDLFRM01389212
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5753
End posion on genome 5678
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gcagcccaat
tRNA gene sequence 
GCCTTCTTAGCTCAGTCGGTAGAGCAGCTCATTCGTAATGAGCAGGTCGCGGGTTCGAGT
CCCGTGGAAGGCTCAA
Downstream region at tRNA end position 
aaacaacgtg
Secondary structure (Cloverleaf model)
>WENV170691271	Thr	CGT
                   t      TCAA aaacaacgtg
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     C - G
                     T + G          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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