The detailed information of tRNA gene sequence


Sequence ID>WENV170691280
Genome IDLFRM01390414
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1972
End posion on genome 1883
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacaaaaaac
tRNA gene sequence 
GGACAGTTGGGTGAGTGGCTGAAACCACCTCCCTGCTAAGGAGACGTACTGGCAACGGTA
CCGAGGGTTCAAATCCCTCACTGTCCGCCA
Downstream region at tRNA end position 
tttgtgggtc
Secondary structure (Cloverleaf model)
>WENV170691280	Ser	GCT
                   c      GCCA tttgtgggtc
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTGGCAACGGTACC
                    C   A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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