The detailed information of tRNA gene sequence


Sequence ID>WENV170691282
Genome IDLFRM01390484
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5187
End posion on genome 5112
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tctgtggtgt
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGTAGAGCACCTGACTCTTAATCAGGGTGTCCTGGGTTCGAAT
CCCCGATGGCCCACCA
Downstream region at tRNA end position 
ttnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170691282	Lys	CTT
                   t      ACCA ttnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     G C C C C     A
      T G A        A      |   | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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