The detailed information of tRNA gene sequence


Sequence ID>WENV170691323
Genome IDLFRM01392385
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6372
End posion on genome 6296
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcaaaacaaa
tRNA gene sequence 
GGTCCCATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGGAGTCCTTGGTTCAAG
CCCAAGTGGGACCACTA
Downstream region at tRNA end position 
ccttataata
Secondary structure (Cloverleaf model)
>WENV170691323	Met	CAT
                   a      ACTA ccttataata
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          C G
                    T     G A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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