The detailed information of tRNA gene sequence


Sequence ID>WENV170691339
Genome IDLFRM01393281
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 766
End posion on genome 691
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ggttatccat
tRNA gene sequence 
GACCCATTAGCTCAGTCGGCAGAGCACTTGACTTTTAATCAAGGTGTCCCGCGTTCGAGT
CGCGGATGGGTCACCA
Downstream region at tRNA end position 
tccccccctg
Secondary structure (Cloverleaf model)
>WENV170691339	Lys	TTT
                   t      ACCA tccccccctg
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G G C G C     A
      T G A        A      | | | | |     G
    C       C T C G       C C G C G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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