The detailed information of tRNA gene sequence


Sequence ID>WENV170691356
Genome IDLFRM01393765
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 51398
End posion on genome 51323
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ctccaccatc
tRNA gene sequence 
GCCGGCTTAGCTCAACTGGTAGAGCAATTGACTTGTAATCAATAGGTTGCGGGTTCAAGT
CCTGCAGCCGGCACCA
Downstream region at tRNA end position 
tgatccgtct
Secondary structure (Cloverleaf model)
>WENV170691356	Thr	TGT
                   c      ACCA tgatccgtct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T G
                    T     C G T C C     A
      C A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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