The detailed information of tRNA gene sequence


Sequence ID>WENV170691362
Genome IDLFRM01393765
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 50876
End posion on genome 50786
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agtaatatcc
tRNA gene sequence 
GGAGGAATACCCAAGTCCGGCTGAAGGGGTCGGTCTTGAAAACCGATAGGCGAGAAATCG
CGCGCGGGTTCAAATCCTGCTTCCTCCGCCA
Downstream region at tRNA end position 
ttgaaaaaat
Secondary structure (Cloverleaf model)
>WENV170691362	Ser	TGA
                   c      GCCA ttgaaaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C G T C C     A
    C T G A        A      | | + | |     A
  C         A C C C       G C G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        G     TAGGCGAGAAATCGCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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