The detailed information of tRNA gene sequence


Sequence ID>WENV170691365
Genome IDLFRM01393765
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 50602
End posion on genome 50527
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ccgccatttt
tRNA gene sequence 
GGCTCGGTAGCTCAGTTGGTAGAGCAATGGACTGAAAATCCATGTGTCACCGGTTCGATT
CCGGTCTGAGCCACCA
Downstream region at tRNA end position 
ttaaaatgct
Secondary structure (Cloverleaf model)
>WENV170691365	Phe	GAA
                   t      ACCA ttaaaatgct
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G + T
                     G - C          T T
                    T     T G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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