The detailed information of tRNA gene sequence


Sequence ID>WENV170691366
Genome IDLFRM01393872
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 22486
End posion on genome 22400
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gccgataaat
tRNA gene sequence 
GCGGATATGGCGGAATTGGCAGACGCGCCAGATTCAGGTTCTGGTCGGGGCAACTCGGTG
GAGGTTCAAGTCCTCTTATCCGCACCA
Downstream region at tRNA end position 
aaccactctg
Secondary structure (Cloverleaf model)
>WENV170691366	Leu	CAG
                   t      ACCA aaccactctg
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     T C T C C     A
      T A A        G      + | | | |     A
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TCGGGGCAACTCGGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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