The detailed information of tRNA gene sequence


Sequence ID>WENV170691390
Genome IDLFRM01394940
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1733
End posion on genome 1809
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gacgccattg
tRNA gene sequence 
GCCCCGATAGCTCAGCTGGATAGAGCATCGGTTTCCTAAACCGCAGGTCAGGGGTTCGAA
TCCCTTTCGGGGCGCCA
Downstream region at tRNA end position 
tattgaattt
Secondary structure (Cloverleaf model)
>WENV170691390	Arg	CCT
                   g      GCCA tattgaattt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     T T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    T   C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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