The detailed information of tRNA gene sequence


Sequence ID>WENV170691399
Genome IDLFRM01395655
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 139
End posion on genome 224
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggttccttgc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTAAAGGCAGCAGACTGTAAATCTGCCCTCTTACGAGTACGC
TGGTTCGAATCCAGCCCCCTCCACCA
Downstream region at tRNA end position 
caagaatgca
Secondary structure (Cloverleaf model)
>WENV170691399	Tyr	GTA
                   c      ACCA caagaatgca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T A A        A     CCTCTTACGAGTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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