The detailed information of tRNA gene sequence


Sequence ID>WENV170691417
Genome IDLFRM01396498
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 438
End posion on genome 362
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccaacgacga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGCCGTAGGTTCAAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
cgaaaaataa
Secondary structure (Cloverleaf model)
>WENV170691417	Met	CAT
                   a      ACCA cgaaaaataa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK