The detailed information of tRNA gene sequence


Sequence ID>WENV170691457
Genome IDLFRM01397954
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1827
End posion on genome 1753
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCGCCCGTAGTTCAATGGATAGAATTAGAGTTTCCGAAGCTCTCGATACAGGTTCGATTC
CTGTCGGGCGCGCCA
Downstream region at tRNA end position 
gaatacaaaa
Secondary structure (Cloverleaf model)
>WENV170691457	Arg	CCG
                   n      GCCA gaatacaaaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    G       C T T G       A C A G G     C
    G       | | | +                 T T
    A       G A A T
      T A          T     CGAT
                    A - T
                    G - C
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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