The detailed information of tRNA gene sequence


Sequence ID>WENV170691475
Genome IDLFRM01398910
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1033
End posion on genome 958
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cctccgttgc
tRNA gene sequence 
GCGGAAATAGCTCAGCTGGTAGAGCGATGGCCTTCCAAGCCGTAGGTCGCGGGTTCGAGT
CCCGTTTTCCGCTCCA
Downstream region at tRNA end position 
gaatattcaa
Secondary structure (Cloverleaf model)
>WENV170691475	Gly	TCC
                   c      TCCA gaatattcaa
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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