The detailed information of tRNA gene sequence


Sequence ID>WENV170691501
Genome IDLFRM01399874
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 63996
End posion on genome 64071
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cgccaccaac
tRNA gene sequence 
GCCCACGTAGCTCAGTAGGCAGAGCGTCGCCTTGGTAAGGCGGAGGTCACCGGTTCAATC
CCGGTCGTGGGCTCCA
Downstream region at tRNA end position 
tttttatata
Secondary structure (Cloverleaf model)
>WENV170691501	Thr	GGT
                   c      TCCA tttttatata
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T G G C C     A
      T G A        A      | | | | |     A
    A       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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