The detailed information of tRNA gene sequence


Sequence ID>WENV170691502
Genome IDLFRM01399908
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1560
End posion on genome 1634
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aaattggagt
tRNA gene sequence 
AGGCGCGTAGCTCAGTGGGAGAGCGCTACCTTGACGTGGTAGATGTCGTCGGTTCGACCC
CGTCCGCGCCTACCA
Downstream region at tRNA end position 
atnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170691502	Val	GAC
                   t      ACCA atnnnnnnnn
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C C
                    T     C T G C C     A
        G A        A      |   | | |     G
      T     C T C G       G T C G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     ATGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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