The detailed information of tRNA gene sequence


Sequence ID>WENV170691543
Genome IDLFRM01402113
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 93
End posion on genome 19
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
acccaattgt
tRNA gene sequence 
GCGGAACTAACTCAGTGGTAGAGTGTCACCTTGCCAAGGTGAAAGTCGCGAGTTCGAATC
TCGTGTTCCGCTCCA
Downstream region at tRNA end position 
cagcttggcc
Secondary structure (Cloverleaf model)
>WENV170691543	Gly	GCC
                   t      TCCA cagcttggcc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G          T A
                    T     T G C T C     A
        G A        A      + | | | |     G
      T     C T C A       G C G A G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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