The detailed information of tRNA gene sequence


Sequence ID>WENV170691569
Genome IDLFRM01403103
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 429
End posion on genome 353
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
actgaaatgc
tRNA gene sequence 
GGGGTCGTAGTTAAGTCGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGTGGGTTCGAG
TCCCATCGGCCCCGCCA
Downstream region at tRNA end position 
aagaaatcaa
Secondary structure (Cloverleaf model)
>WENV170691569	Asp	GTC
                   c      GCCA aagaaatcaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    C       A T T G       G T G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK