The detailed information of tRNA gene sequence


Sequence ID>WENV170691591
Genome IDLFRM01404438
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1356
End posion on genome 1272
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
atatatgcga
tRNA gene sequence 
GCGGGGGTTGCCGAGCCAGGTCAAAGGCGCTGGATTTAGGGTCCAGTCTCGCAGGAGTTC
AAGGGTTCGAATCCCTTCCCCCGCAttc
Downstream region at tRNA end position 
ctggtgctgt
Secondary structure (Cloverleaf model)
>WENV170691591	Leu	TAG
                   a      Attc ctggtgctgt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C C G A        T      | | | | |     G
  A         G C C G       A A G G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCTCGCAGGAGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       G
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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