The detailed information of tRNA gene sequence


Sequence ID>WENV170691656
Genome IDLFRM01408696
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 490
End posion on genome 564
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttgtcgttct
tRNA gene sequence 
GCGCCCGTAGTTCAATGGATAGAATTAGAGTTTCCGAAGCTCTCGATACAGGTTCGATTC
CTGTCGGGCGCGCCA
Downstream region at tRNA end position 
gtttcggttg
Secondary structure (Cloverleaf model)
>WENV170691656	Arg	CCG
                   t      GCCA gtttcggttg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    G       C T T G       A C A G G     C
    G       | | | +                 T T
    A       G A A T
      T A          T     CGAT
                    A - T
                    G - C
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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