The detailed information of tRNA gene sequence


Sequence ID>WENV170692170
Genome IDLGOV01000100
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 225831
End posion on genome 225921
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctaacagtt
tRNA gene sequence 
GGAGTAGTACTCAAGTGGCTGAAGAGGTGCCCCTGCTAAGGGTATAGGTCGTTTGCGCGG
CGCGAGAGTTCAAATCTCTCCTACTCCGCCA
Downstream region at tRNA end position 
gtaaaaaatt
Secondary structure (Cloverleaf model)
>WENV170692170	Ser	GCT
                   t      GCCA gtaaaaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G A G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGTTTGCGCGGCGC
                    T - A
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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