The detailed information of tRNA gene sequence


Sequence ID>WENV170692178
Genome IDLGOV01000100
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 38888
End posion on genome 38805
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttgcgtgttt
tRNA gene sequence 
GGGCGGGTAGCGAAGTGGTTAAACGCGGCAGACTGTAACTCTGCTCCTTGGGGTTCGGCG
GTTCGAATCCGTCCCCTCCCACCA
Downstream region at tRNA end position 
tttgggctat
Secondary structure (Cloverleaf model)
>WENV170692178	Tyr	GTA
                   t      ACCA tttgggctat
                     G - C
                     G - C
                     G - C
                     C   T
                     G - C
                     G - C
                     G - C          T A
                    T     C T G C C     A
      T G A        A      | + | | |     G
    G       A G C G       G G C G G     C
    G         | | |                 T T
    T       A C G C
      T A A        G     TCCTTGGGGTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       C
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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