The detailed information of tRNA gene sequence


Sequence ID>WENV170692185
Genome IDLGOV01000100
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 37467
End posion on genome 37377
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctaatttac
tRNA gene sequence 
GGAGGAATACCCAAGTCTGGCTGAAGGGACTGGTCTTGAAAACCAGCAGGCGAGTAATCG
CGCGGGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
ttatcatttt
Secondary structure (Cloverleaf model)
>WENV170692185	Ser	TGA
                   c      GCCA ttatcatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  T         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGCGAGTAATCGCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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