The detailed information of tRNA gene sequence


Sequence ID>WENV170692186
Genome IDLGOV01000100
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 37232
End posion on genome 37157
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnnnnnnat
tRNA gene sequence 
GGCCTGGTAGCTCAGTTGGTAGAGCAACGGATTGAAAATCCGTGTGTCGGCAGTTCAATT
CTGTCCCGGGCCACCA
Downstream region at tRNA end position 
tcaataactt
Secondary structure (Cloverleaf model)
>WENV170692186	Phe	GAA
                   t      ACCA tcaataactt
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C          T T
                    T     C T G T C     A
      T G A        A      | + | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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