The detailed information of tRNA gene sequence


Sequence ID>WENV170692193
Genome IDLGOV01000298
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 2227
End posion on genome 2314
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ataaaagtct
tRNA gene sequence 
GCCGGAGTGGTGAAATTGGTAGACGCAGAGGACTCAAAATCCTCCGGACCTTGCGTCCGT
GTCGGTTCGATTCCGACCTCCGGCACCA
Downstream region at tRNA end position 
tcaaatcaaa
Secondary structure (Cloverleaf model)
>WENV170692193	Leu	CAA
                   t      ACCA tcaaatcaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       A G T G       G T C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CGGACCTTGCGTCCGT
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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