The detailed information of tRNA gene sequence


Sequence ID>WENV170692226
Genome IDLGOV01001130
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 8052
End posion on genome 7977
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
attacaaatT
tRNA gene sequence 
GGGCTCGTGGTCTAGTTGGTTATGACGTCGCCTTCACACGGCGGAGGTCCGGAGTTCGAA
TCTCCGCGGGCCCATtc
Downstream region at tRNA end position 
agattgagag
Secondary structure (Cloverleaf model)
>WENV170692226	Val	CAC
                   T      ATtc agattgagag
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G C C T C     A
      T G A        G      | | | | |     G
    T       T C T G       C G G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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