The detailed information of tRNA gene sequence


Sequence ID>WENV170692262
Genome IDLGOV01001797
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 359
End posion on genome 434
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caccatattt
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCGAAT
CCTGCCTCCGCAACCA
Downstream region at tRNA end position 
tttttttaac
Secondary structure (Cloverleaf model)
>WENV170692262	Met	CAT
                   t      ACCA tttttttaac
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     G
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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