The detailed information of tRNA gene sequence


Sequence ID>WENV170692324
Genome IDLGOV01003149
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 3997
End posion on genome 3915
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gccattatgt
tRNA gene sequence 
GCGGGTGTGGCGGAACTGGCAGACGCGCTAGACTTAGGATCTAGTTCTTCGGAGTGCAGG
TTCAATTCCTGTCACCCGCACCA
Downstream region at tRNA end position 
tgttgacact
Secondary structure (Cloverleaf model)
>WENV170692324	Leu	TAG
                   t      ACCA tgttgacact
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T G T C C     A
      C A A        G      + | | | |     A
    T       G G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TTCTTCGGAGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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